Gastroenterology Clinical Laboratory

Clinical Laboratory Improvement Amendments (CLIA) Lab

We are a CLIA-certified laboratory located in Wilmington, Delaware. The GI Clinical Lab, a part of the Gastroenterology Laboratory at Nemours, provides the following tests:

Disaccharidase Determination

Small Bowel Biopsy
The activity of disaccharidases, including lactase, maltase, sucrase, palatinase and glucoamylase, can be determined from an intestinal biopsy with approximately 2 to 5 mg wet weight. Avoid contamination with traces of the fixative used for surgical pathology biopsies. Upon collection, the specimen should be placed in a small, tightly capped, plastic tube and immediately frozen on dry ice or stored in a freezer at -20°C to -70°C (no automatic defrost cycles). The biopsy should not be placed on gauze or a toothpick, nor should any solutions be added. The sample should be shipped with enough dry ice to remain frozen. Enzyme activity may be affected if the sample thaws.

Pancreatic Enzyme Activities

Duodenal Aspirate
Amylase, lipase, trypsin, chymotrypsin and elastase activities can be determined from duodenal fluid. A minimum of 0.2 ml fluid is required to analyze the five enzymes, protein content, and pH. The sample can be a single fluid or multiple fluids. The fluid should be placed in a small, tightly capped, plastic tube. Keep the sample frozen and ship on dry ice.

Gastric Pepsin Assay

Gastric pepsin detected in the airway of patients is a specific and sensitive marker to assess pulmonary aspiration. The GI Clinical Lab at Nemours offers a sensitive, reliable enzymatic test to detect gastric pepsin in the airway samples. The assay has high specificity as it detects pepsin A that is exclusively expressed in the gastric mucosa. For more information on the research studies that used the assay or a similar enzymatic assay, please see the References listed below.

Collecting Airway Aspirate
To collect tracheal secretion: Attach a LUKI trap to a suction catheter, pass the catheter down the endotracheal tube, and apply suction to the catheter as the catheter is withdrawn. If the secretion is too thick to be withdrawn, instill saline (2 cc) to the tracheal tube prior to aspirating the secretion.

To collect bronchial secretion: Bronchial secretion can be collected using a standard collection protocol. Collect 1-2 cc bronchial washing fluid in a plain specimen tube.

Please avoid over-diluting the secretion with a large amount of saline during the collection. A minimum of 0.5 cc fluid is required to determine gastric pepsin activity, protein content, and pH. The airway fluid should be transferred to a small, tightly capped, plastic tube and frozen immediately after collection. Keep sample frozen and ship on dry ice.

Pricing

Please contact us for more information and individual test prices.

GI Clinical Lab
Alfred I. duPont Hospital for Children
A/R bldg. Rm 250
1600 Rockland Road
Wilmington, DE 19803
(302) 651-6893

Research Project Development

The GI Clinical Lab at Nemours also accepts samples for research studies and clinical trials. The GI Research Lab, a part of the Gastroenterology Laboratory, provides services to develop research projects for industry and research institutions. Current research collaborators include Mayo Clinic, Florida; Cooper University Hospital, New Jersey; and Digestive Care, Inc., Pennsylvania.

References

  1. Fields N, He Z, Bornstein J, Mehta D. Pulmonary Pepsin C and A levels as markers of microaspiration- review of 200 bronchoscopy cases. NASPGHAN 2009, Washington DC
  2. Farhath S, Saslow J, Soundar S, He Z, Amendolia B, Eydelman R, Pierzchalski K, Pyon K, Pearlman P, Stahl G, Mehta D, Aghai Z. Prone positioning decreases pepsin in tracheal aspirate from premature ventilated infants. Eastern Society for Pediatric Research Annual Meeting, Philadelphia, PA; Pediatric Academic Societies Annual Meeting, Baltimore, MD; and Pediatric Academic Societies 2009
  3. Krishnan U, Mitchell JD, Messina I, Day AS, Bohane TD. Assay of tracheal pepsin as a marker of reflux aspiration. J Pediatr Gastroenterol Nutr 2002; 35: 303–8
  4. Farrell S, McMaster C, Gibson D, Shields MD, McCallion WA. Pepsin in bronchoalveolar lavage fluid: a specific and sensitive method of diagnosing gastro-esophageal reflux-related pulmonary aspiration. J Pediatr Surg. 2006 Feb;41(2):289-93
  5. Gopalareddy V, He Z, Soundar S, Bolling L, Shah M, Penfil S, McCloskey JJ, Mehta DI. Assessment of the prevalence of microaspiration by gastric pepsin in the airway on ventilated children. Acta Paediatr 2008 Jan 97(1):55-60
  6. Farhath S, Aghai ZH, Nakhla T, Saslow J, He Z, Soundar S, Mehta DI. Pepsin, a reliable marker of gastric aspiration, is frequently detected in tracheal aspirates from premature ventilated neonates: relationship with feeding and methylxanthine therapy. J of Pediatr Gastroenterology & Nutrition 2006 Sept 43(3):336-41
  7. Farhath S, Aghai ZH, Nakhla T, Saslow J, He Z, Soundar S, Mehta DI. Pepsin, A Marker of Gastric Contents, is Increased in Tracheal Aspirates from Premature Infants Developing Bronchopulmonary Dysplasia. Pediatrics 2008;121;e253-e259
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