Deepti Anand

Rare variants analyses suggest novel cleft genes in the African population; SCIENTIFIC REPORTS; (2024).

Shared genetic risk between major orofacial cleft phenotypes in an African population; GENETIC EPIDEMIOLOGY; (2024).

Genomic analyses in African populations identify novel risk loci for cleft palate (vol 28, pg 1038, 2019); HUMAN MOLECULAR GENETICS; (2023).

High-Throughput Transcriptomics of Celf1 Conditional Knockout Lens Identifies Downstream Networks Linked to Cataract Pathology; CELLS; (2023).

Identification of alternative spliced RNA targets of the cataract-linked RNA-binding protein CELF1: use of an multi-omics approach based an iCLIP-seq and RNA-seq; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2023).

Lens Epithelial Explants Treated with Vitreous Humor Undergo Alterations in Chromatin Landscape with Concurrent Activation of Genes Associated with Fiber Cell Differentiation and Innate Immune Response; CELLS; (2023).

Proteomic profiling of retina and retinal pigment epithelium combined embryonic tissue to facilitate ocular disease gene discovery; HUMAN GENETICS; (2023).

Transcriptome analysis of early postnatal lenses from Celf1 conditional knockout mice identify potential new regulators in lens development; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2023).

An integrative analysis using iCLIP-seq and RNA-Seq to identify genes post-transcriptionally regulated by the cataract-linked RNA-binding protein CELF1 in the lens; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2022).

Deficiency of the bZIP transcription factors Mafg and Mafk causes misexpression of genes in distinct pathways and results in lens embryonic developmental defects.; Frontiers in cell and developmental biology; (2022).

Genome-wide Gene-by-Sex Interaction Studies Identify Novel Nonsyndromic Orofacial Clefts Risk Locus; Journal of Dental Research; (2022).

High-throughput single-cell RNA sequencing of the developing lens; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2022).

The small Maf transcription factors Mafg and Mafk are required for embryonic lens development; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2022).

Whole-genome sequencing reveals de-novo mutations associated with nonsyndromic cleft lip/palate.; Scientific reports; (2022).

A large multiethnic GWAS meta-analysis of cataract identifies new risk loci and sex-specific effects.; Nature communications; (2021).

Genome-Wide Analysis of Differentially Expressed miRNAs and Their Associated Regulatory Networks in Lenses Deficient for the Congenital Cataract-Linked Tudor Domain Containing Protein TDRD7.; Frontiers in cell and developmental biology; (2021).

Transcriptome analysis of lens epithelial explants upon vitreous-induced fiber cell differentiation; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2021).

Variant analyses of candidate genes in orofacial clefts in multi-ethnic populations.; Oral diseases; (2021).

Variant Analyses of Candidate Genes in Orofacial Clefts in Multi-Ethnic Populations; FASEB JOURNAL; (2021).

Characterization of long noncoding RNAs in lens development; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2020).

The Tudor-domain protein TDRD7, mutated in congenital cataract, controls the heat shock protein HSPB1 (HSP27) and lens fiber cell morphology.; Human molecular genetics; (2020).

Missense Pathogenic variants in KIF4A Affect Dental Morphogenesis Resulting in X-linked Taurodontism, Microdontia and Dens-Invaginatus.; Frontiers in genetics; (2019).

A systematic genetic analysis and visualization of phenotypic heterogeneity among orofacial cleft GWAS signals.; Genetic epidemiology; (2019).

Genomic analyses in African populations identify novel risk loci for cleft palate.; Human molecular genetics; (2019).

High-throughput transcriptome analysis reveals that the loss of Pten activates a novel NKX6-1/RASGRP1 regulatory module to rescue microphthalmia caused by Fgfr2-deficient lenses.; Human genetics; (2019).

Molecular characterization of the human lens epithelium-derived cell line SRA01/04.; Experimental eye research; (2019).

MS/MS in silico subtraction-based proteomic profiling as an approach to facilitate disease gene discovery: application to lens development and cataract.; Human genetics; (2019).

Mutations in GDF11 and the extracellular antagonist, Follistatin, as a likely cause of Mendelian forms of orofacial clefting in humans.; Human mutation; (2019).

MUTATIONS IN THE EPITHELIAL CADHERIN-P120-CATENIN COMPLEX ARE SIGNIFICANT CONTRIBUTORS TO NON-SYNDROMIC CLEFT LIP WITH OR WITHOUT CLEFT PALATE; AMERICAN JOURNAL OF MEDICAL GENETICS PART A; (2019).

Pathogenic variants in PLOD3 result in a Stickler syndrome-like connective tissue disorder with vascular complications.; Journal of medical genetics; (2019).

Six2 regulates Pax9 expression, palatogenesis and craniofacial bone formation.; Developmental biology; (2019).

A zebrafish model of foxe3 deficiency demonstrates lens and eye defects with dysregulation of key genes involved in cataract formation in humans; HUMAN GENETICS; (2018).

Identification of OAF and PVRL1 as candidate genes for an ocular anomaly characterized by Peters anomaly type 2 and ectopia lentis.; Experimental eye research; (2018).

iSyTE 2.0: a database for expression-based gene discovery in the eye.; Nucleic acids research; (2018).

Mutation update of transcription factor genes FOXE3, HSF4, MAF, and PITX3 causing cataracts and other developmental ocular defects.; Human mutation; (2018).

Mutations in the Epithelial Cadherin-p120-Catenin Complex Cause Mendelian Non-Syndromic Cleft Lip with or without Cleft Palate.; American journal of human genetics; (2018).

Prdm16 and Mecom mutants exhibit cleft secondary palate as a result of perturbations that affect different stages of palatogenesis; FASEB JOURNAL; (2018).

RNA sequencing-based transcriptomic profiles of embryonic lens development for cataract gene discovery.; Human genetics; (2018).

The RNA-binding protein Celf1 post-transcriptionally regulates p27Kip1 and Dnase2b to control fiber cell nuclear degradation in lens development.; PLoS genetics; (2018).

Transcriptome landscape of early lens development; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2018).

Exome sequencing provides additional evidence for the involvement of ARHGAP29 in Mendelian orofacial clefting and extends the phenotypic spectrum to isolated cleft palate.; Birth defects research; (2017).

N-myc regulates growth and fiber cell differentiation in lens development.; Developmental biology; (2017).

PHASIS: A computational suite for de novo discovery and characterization of phased, siRNA-generating loci and their miRNA triggers; []; (2017).

RNA-seq based identification of long non-coding RNAs (lncRNAs) in early lens development; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2017).

β1-Integrin Deletion From the Lens Activates Cellular Stress Responses Leading to Apoptosis and Fibrosis.; Investigative ophthalmology & visual science; (2017).

Identification of abnormally expressed miRNAs in Tdrd7 null mouse lens; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2016).

Integration of cornea expression microarrays in iSyTE to expedite eye gene discovery; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2016).

Molecular Characterization of Two Human Lens Epithelial Cell Lines and Their Suitability to Study Function of Cataract Genes; FASEB JOURNAL; (2016).

Novel phenotypes and loci identified through clinical genomics approaches to pediatric cataract.; Human genetics; (2016).

RNA sequencing analysis of Celf1 mouse mutants identifies a cohort of abnormally expressed lens development regulators; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2016).

Systems biology of lens development: A paradigm for disease gene discovery in the eye.; Experimental eye research; (2016).

β1-integrn deletion from lens activates AKT signaling and EGR1 expression in the epithelium leading to fibrosis and apoptosis; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2016).

iSyTE-based in silico subtraction on RNA-seq datasets effectively identifies regulators of lens development; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2015).

A novel BTB/POZ domain zinc finger transcription factor Zbtb8b functions in lens development; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2015).

An integrative approach to analyze microarray datasets for prioritization of genes relevant to lens biology and disease.; Genomics data; (2015).

Co-expression based regulatory network for lens development; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2015).

Compound mouse mutants of bZIP transcription factors Mafg and Mafk reveal a regulatory network of non-crystallin genes associated with cataract.; Human genetics; (2015).

Molecular characterization of human lens epithelial cell lines HLE-B3 and SRA01/04 and their utility to model lens biology; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2015).

Novel InDel variation in GS3 locus and development of InDel based marker for marker assisted breeding of short grain aromatic rices; JOURNAL OF PLANT BIOCHEMISTRY AND BIOTECHNOLOGY; (2015).

Prox1 and fibroblast growth factor receptors form a novel regulatory loop controlling lens fiber differentiation and gene expression.; Development (Cambridge, England); (2015).

Prox1 and fibroblast growth factor receptors function in a novel regulatory loop to control lens fiber differentiation and gene expression; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2015).

A web-resource of curated lens gene regulatory networks reveals the interplay of diverse pathways in ocular development and disease; INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE; (2014).

Molecular characterization of mouse lens epithelial cell lines and their suitability to study RNA granules and cataract associated genes.; Experimental eye research; (2014).

Validation of gene based marker-QTL association for grain dimension traits in rice; Journal of Plant Biochemistry and Biotechnology; (2013).

Analysis of molecular diversity and fingerprinting of commercially grown Indian rice hybrids; Journal of Plant Biochemistry and Biotechnology; (2012).

Adsorption and Desorption of Chlorinated Compounds from Pristine and Thermally Treated Multiwalled Carbon Nanotubes; JOURNAL OF PHYSICAL CHEMISTRY C; (2011).

Marker assisted selection: a paradigm shift in Basmati breeding; INDIAN JOURNAL OF GENETICS AND PLANT BREEDING; (2011).

Carbon nanotube-textured sand for controlling bioavailability of contaminated sediments; NANO RESEARCH; (2010).

Marker-assisted improvement of bacterial blight resistance in parental lines of Pusa RH10, a superfine grain aromatic rice hybrid; Molecular Breeding; (2010).

Safety and efficacy of Intacs in Indian eyes with keratoconus: An initial report; INDIAN JOURNAL OF OPHTHALMOLOGY; (2009).

Findings on placental pathology and routine biochemistry in the immediate neonatal period; PLACENTA; (2007).

Inconsistencies in reports that relate placental histology to brain injury in preterm infants; PLACENTA; (2007).

Placental pathology and neonatal heart rate; PLACENTA; (2007).