Deepti Anand
Research Scientist- Computational Biology
- Developmental Biology
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Genome-wide Gene-by-Sex Interaction Studies Identify Novel Nonsyndromic Orofacial Clefts Risk Locus; Journal of Dental Research; (2022).
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Whole-genome sequencing reveals de-novo mutations associated with nonsyndromic cleft lip/palate.; Scientific reports; (2022).
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Deficiency of the bZIP transcription factors Mafg and Mafk causes misexpression of genes in distinct pathways and results in lens embryonic developmental defects.; Frontiers in cell and developmental biology; (2022).
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Genome-Wide Analysis of Differentially Expressed miRNAs and Their Associated Regulatory Networks in Lenses Deficient for the Congenital Cataract-Linked Tudor Domain Containing Protein TDRD7.; Frontiers in cell and developmental biology; (2021).
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A large multiethnic GWAS meta-analysis of cataract identifies new risk loci and sex-specific effects.; Nature communications; (2021).
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Variant analyses of candidate genes in orofacial clefts in multi-ethnic populations.; Oral diseases; (2021).
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The Tudor-domain protein TDRD7, mutated in congenital cataract, controls the heat shock protein HSPB1 (HSP27) and lens fiber cell morphology.; Human molecular genetics; (2020).
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Pathogenic variants in <i>PLOD3</i> result in a Stickler syndrome-like connective tissue disorder with vascular complications.; Journal of medical genetics; (2019).
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A systematic genetic analysis and visualization of phenotypic heterogeneity among orofacial cleft GWAS signals.; Genetic epidemiology; (2019).
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Mutations in GDF11 and the extracellular antagonist, Follistatin, as a likely cause of Mendelian forms of orofacial clefting in humans.; Human mutation; (2019).
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Molecular characterization of the human lens epithelium-derived cell line SRA01/04.; Experimental eye research; (2019).
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MS/MS in silico subtraction-based proteomic profiling as an approach to facilitate disease gene discovery: application to lens development and cataract.; Human genetics; (2019).
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<i>Missense Pathogenic variants in KIF4A</i> Affect Dental Morphogenesis Resulting in X-linked Taurodontism, Microdontia and Dens-Invaginatus.; Frontiers in genetics; (2019).
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High-throughput transcriptome analysis reveals that the loss of Pten activates a novel NKX6-1/RASGRP1 regulatory module to rescue microphthalmia caused by Fgfr2-deficient lenses.; Human genetics; (2019).
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Six2 regulates Pax9 expression, palatogenesis and craniofacial bone formation.; Developmental biology; (2019).
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Genomic analyses in African populations identify novel risk loci for cleft palate.; Human molecular genetics; (2019).
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RNA sequencing-based transcriptomic profiles of embryonic lens development for cataract gene discovery.; Human genetics; (2018).
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The RNA-binding protein Celf1 post-transcriptionally regulates p27Kip1 and Dnase2b to control fiber cell nuclear degradation in lens development.; PLoS genetics; (2018).
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Mutations in the Epithelial Cadherin-p120-Catenin Complex Cause Mendelian Non-Syndromic Cleft Lip with or without Cleft Palate.; American journal of human genetics; (2018).
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iSyTE 2.0: a database for expression-based gene discovery in the eye.; Nucleic acids research; (2018).
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Identification of OAF and PVRL1 as candidate genes for an ocular anomaly characterized by Peters anomaly type 2 and ectopia lentis.; Experimental eye research; (2018).
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Mutation update of transcription factor genes FOXE3, HSF4, MAF, and PITX3 causing cataracts and other developmental ocular defects.; Human mutation; (2018).
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PHASIS: A computational suite for <i>de novo</i> discovery and characterization of phased, siRNA-generating loci and their miRNA triggers; []; (2017).
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Exome sequencing provides additional evidence for the involvement of ARHGAP29 in Mendelian orofacial clefting and extends the phenotypic spectrum to isolated cleft palate.; Birth defects research; (2017).
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N-myc regulates growth and fiber cell differentiation in lens development.; Developmental biology; (2017).
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β1-Integrin Deletion From the Lens Activates Cellular Stress Responses Leading to Apoptosis and Fibrosis.; Investigative ophthalmology & visual science; (2017).
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Novel phenotypes and loci identified through clinical genomics approaches to pediatric cataract.; Human genetics; (2016).
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Systems biology of lens development: A paradigm for disease gene discovery in the eye.; Experimental eye research; (2016).
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Compound mouse mutants of bZIP transcription factors Mafg and Mafk reveal a regulatory network of non-crystallin genes associated with cataract.; Human genetics; (2015).
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An integrative approach to analyze microarray datasets for prioritization of genes relevant to lens biology and disease.; Genomics data; (2015).
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Prox1 and fibroblast growth factor receptors form a novel regulatory loop controlling lens fiber differentiation and gene expression.; Development (Cambridge, England); (2015).
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Molecular characterization of mouse lens epithelial cell lines and their suitability to study RNA granules and cataract associated genes.; Experimental eye research; (2014).
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Validation of gene based marker-QTL association for grain dimension traits in rice; Journal of Plant Biochemistry and Biotechnology; (2013).
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Analysis of molecular diversity and fingerprinting of commercially grown Indian rice hybrids; Journal of Plant Biochemistry and Biotechnology; (2012).
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Marker-assisted improvement of bacterial blight resistance in parental lines of Pusa RH10, a superfine grain aromatic rice hybrid; Molecular Breeding; (2010).
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